PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02181.1.g00080.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 169aa    MW: 18721 Da    PI: 10.5681
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02181.1.g00080.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.12.3e-10106128123
                                   ---SS-EEEEEEE--TT-SS-EE CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                                   ldDg++WrKYGqK + g+++prs
  Zpz_sc02181.1.g00080.1.am.mk 106 LDDGFSWRKYGQKGILGAKYPRS 128
                                   59********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.4E-1693168IPR003657WRKY domain
SuperFamilySSF1182901.07E-10100168IPR003657WRKY domain
PROSITE profilePS5081113.735101169IPR003657WRKY domain
SMARTSM007744.9E-14106169IPR003657WRKY domain
PfamPF031063.5E-7107129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MESVGGDGGG RFTLESELAQ VQNILRELEA HMNQQDLPAA AREICGELAS RVERSLRVAR  60
SWVPPGSADG STGGSAAKDA QFKRRKGMPC VRSQVRVASL HDTAALDDGF SWRKYGQKGI  120
LGAKYPRSAL DHQRPHVTNH SQTLRHTAYF RCTHRTTQRC HATKQVQRT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002440286.11e-50hypothetical protein SORBIDRAFT_09g029050
TrEMBLC5YVZ91e-50C5YVZ9_SORBI; Putative uncharacterized protein Sb09g029050
STRINGSb09g029050.14e-50(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.13e-18WRKY DNA-binding protein 30